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Command used: wombat soccov.par
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wombat soccov.par
Script started on 2025-05-26 17:24:10+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../SimPed.dat
 Total no. of animal IDs found			   =	    13000
 No. of "subjects" in data			   =	     8000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		7
 adjact ivcol	 17226594    17226594
 Start of "GENMMD": no. of rows 		   =	    28001
 genmmd        5000	  19319 	  9
 genmmd       10000	  15073 	 14
 End of "GENMMD": no of subscripts		   =	   147895
 adjact ivcol	 17226594    17226594
 End of "SMBFCT": maxsub			   =	   145742	 28002
		  maxlnz			   =	   350860
		  nnops 			   = 0.316182E+07 0.100000E+16
 REML analysis has few parameters to be estimated
  --> switching to AI-REML w/out preliminary EM steps
 "Super-nodes" :  No. of nodes			   =	    12908
		  Max. size			   =	       26
 *** AI iterate     0  log L =	-24476.2305	 D =   0.0000	    0.0000	Time	    2	     1
 *** AI iterate     1  log L =	-24472.2424	 D =   3.9881	   0.57411E-01	Time	    3	     0
 *** AI iterate     2  log L =	-24472.2158	 D =  0.26584E-01  0.40911E-02	Time	    3	     0
 *** AI iterate     3  log L =	-24472.2158	 D =  0.18306E-05  0.74113E-04	Time	    3	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.183062E-05
     Norm of gradient vector			   = 0.630941E-02 (should be close to 0)
     ... "Cholesky" scale			   = 0.698016E-03 (should be close to 0)
     Newton decrement				   =-0.177045E-05 (should be close to 0)
   1  animal+bnimal	     26000  zero soln.s       0
   2  group		      2000  zero soln.s       0
 SS residuals	347819.
 Eigenvalues of AI matrix
    123.585	   55.8709	  14.6127	 4.50294	2.83749
 writing out of var functions for correlated random
 effects not implemented - skipping ...
 Total time used (secs): CPU =		14  System =	       3
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


13.925u 0.764s 0:03.09 475.0%	0+0k 0+16808io 0pf+0w

Script done on 2025-05-26 17:24:13+1000
