======================================================
Command used: wombat socdil0.par
======================================================

wombat socdil0.par
Script started on 2025-05-26 17:24:17+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../SimPed.dat
 Total no. of animal IDs found			   =	    13000
 No. of "subjects" in data			   =	     8000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		7
 adjact ivcol	 17226594    17226594
 Start of "GENMMD": no. of rows 		   =	    28001
 genmmd        5000	  19319 	  9
 genmmd       10000	  15073 	 14
 End of "GENMMD": no of subscripts		   =	   147895
 adjact ivcol	 17226594    17226594
 End of "SMBFCT": maxsub			   =	   145742	 28002
		  maxlnz			   =	   350860
		  nnops 			   = 0.316182E+07 0.100000E+16
 "Super-nodes" :  No. of nodes			   =	    12908
		  Max. size			   =	       26
 *** EM round	    0  log L =	-23965.3910	 D =   0.0000	    0.0000	Time	    3	     1
 *** EM round	    1  log L =	-23932.1074	 D =   33.284	   0.11053	Time	    3	     0
 *** EM round	    2  log L =	-23922.4414	 D =   9.6659	   0.56781E-01	Time	    3	     0
 *** EM round	    3  log L =	-23918.8487	 D =   3.5928	   0.30466E-01	Time	    3	     0
 *** EM round	    4  log L =	-23916.6737	 D =   2.1750	   0.17016E-01	Time	    3	     0
 *** EM round	    5  log L =	-23914.7716	 D =   1.9021	   0.10041E-01	Time	    3	     0
 *** EM round	    6  log L =	-23912.9219	 D =   1.8497	   0.64481E-02	Time	    3	     0
 *** AI iterate     7  log L =	-23855.2407	 D =   57.681	   0.27262	Time	    3	     0
 *** AI iterate     8  log L =	-23838.7064	 D =   16.534	   0.14056	Time	    3	     0
 *** AI iterate     9  log L =	-23836.7194	 D =   1.9870	   0.33658E-01	Time	    3	     0
 *** AI iterate    10  log L =	-23836.7071	 D =  0.12296E-01  0.41321E-02	Time	    3	     0
 *** AI iterate    11  log L =	-23836.7071	 D =  0.86216E-05  0.11434E-03	Time	    3	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.862161E-05
     Norm of gradient vector			   = 0.246961E-01 (should be close to 0)
     ... "Cholesky" scale			   = 0.886476E-02 (should be close to 0)
     Newton decrement				   =-0.848431E-05 (should be close to 0)
   1  animal+bnimal	     26000  zero soln.s       0
   2  group		      2000  zero soln.s       0
 SS residuals	536184.
 Eigenvalues of AI matrix
    122.958	   61.2769	  13.7519	 6.00203	4.66335
 writing out of var functions for correlated random
 effects not implemented - skipping ...
 Total time used (secs): CPU =		43  System =	       9
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


41.803u 1.280s 0:09.70 444.1%	0+0k 0+16824io 0pf+0w

Script done on 2025-05-26 17:24:27+1000
======================================================
Command used: wombat socdil05.par
======================================================

wombat socdil05.par
Script started on 2025-05-26 17:24:27+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../SimPed.dat
 Total no. of animal IDs found			   =	    13000
 No. of "subjects" in data			   =	     8000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		7
 adjact ivcol	 17226594    17226594
 Start of "GENMMD": no. of rows 		   =	    28001
 genmmd        5000	  19319 	  9
 genmmd       10000	  15073 	 14
 End of "GENMMD": no of subscripts		   =	   147895
 adjact ivcol	 17226594    17226594
 End of "SMBFCT": maxsub			   =	   145742	 28002
		  maxlnz			   =	   350860
		  nnops 			   = 0.316182E+07 0.100000E+16
 "Super-nodes" :  No. of nodes			   =	    12908
		  Max. size			   =	       26
 *** EM round	    0  log L =	-23849.6363	 D =   0.0000	    0.0000	Time	    2	     1
 *** EM round	    1  log L =	-23847.3409	 D =   2.2954	   0.36056E-01	Time	    3	     0
 *** EM round	    2  log L =	-23847.3073	 D =  0.33577E-01  0.18380E-01	Time	    3	     0
 *** EM round	    3  log L =	-23847.5508	 D = -0.24350	   0.95610E-02	Time	    3	     0
 (PX-)EM iterate produced wrong step - aborted
 ... this is most likely due to numerical problems
 *** AI iterate     4  log L =	-23839.0797	 D =   8.2276	   0.12949	Time	    3	     0
 *** AI iterate     5  log L =	-23837.9863	 D =   1.0934	   0.31333E-01	Time	    3	     0
 *** AI iterate     6  log L =	-23837.3235	 D =  0.66281	   0.12205E-01	Time	    3	     0
 *** AI iterate     7  log L =	-23836.9224	 D =  0.40113	   0.14825E-01	Time	    3	     0
 *** AI iterate     8  log L =	-23836.6436	 D =  0.27880	   0.81052E-02	Time	    3	     0
 *** AI iterate     9  log L =	-23836.4562	 D =  0.18738	   0.94656E-02	Time	    3	     0
 *** AI iterate    10  log L =	-23836.3233	 D =  0.13296	   0.61529E-02	Time	    3	     0
 *** AI iterate    11  log L =	-23836.2310	 D =  0.92221E-01  0.64640E-02	Time	    3	     0
 *** AI iterate    12  log L =	-23836.1656	 D =  0.65478E-01  0.46708E-02	Time	    3	     0
 *** AI iterate    13  log L =	-23836.1196	 D =  0.45971E-01  0.45190E-02	Time	    3	     0
 *** AI iterate    14  log L =	-23836.0870	 D =  0.32616E-01  0.34824E-02	Time	    3	     0
 *** AI iterate    15  log L =	-23836.0639	 D =  0.23027E-01  0.31944E-02	Time	    3	     0
 *** AI iterate    16  log L =	-23836.0476	 D =  0.16334E-01  0.25580E-02	Time	    3	     0
 *** AI iterate    17  log L =	-23836.0360	 D =  0.11564E-01  0.22701E-02	Time	    3	     0
 *** AI iterate    18  log L =	-23836.0278	 D =  0.82041E-02  0.18591E-02	Time	    3	     0
 *** AI iterate    19  log L =	-23836.0220	 D =  0.58161E-02  0.16168E-02	Time	    3	     0
 *** AI iterate    20  log L =	-23836.0179	 D =  0.41275E-02  0.13414E-02	Time	    3	     0
 *** AI iterate    21  log L =	-23836.0150	 D =  0.29284E-02  0.11523E-02	Time	    3	     0
 *** AI iterate    22  log L =	-23836.0129	 D =  0.20787E-02  0.96300E-03	Time	    3	     0
 *** AI iterate    23  log L =	-23836.0114	 D =  0.14754E-02  0.82115E-03	Time	    3	     0
 *** AI iterate    24  log L =	-23836.0104	 D =  0.10475E-02  0.68902E-03	Time	    3	     0
 *** AI iterate    25  log L =	-23836.0096	 D =  0.74371E-03  0.58489E-03	Time	    3	     0
 *** AI iterate    26  log L =	-23836.0091	 D =  0.52808E-03  0.49187E-03	Time	    3	     0
 *** AI iterate    27  log L =	-23836.0087	 D =  0.37499E-03  0.41639E-03	Time	    3	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.374987E-03
     Norm of gradient vector			   = 0.148849	  (should be close to 0)
     ... "Cholesky" scale			   = 0.288320E-01 (should be close to 0)
     Newton decrement				   =-0.203738E-03 (should be close to 0)
   1  animal+bnimal	     26000  zero soln.s       0
   2  group		      2000  zero soln.s       0
 SS residuals	531290.
 Eigenvalues of AI matrix
    122.847	   49.8271	  13.0218	 4.80484	4.20951
 writing out of var functions for correlated random
 effects not implemented - skipping ...
 Total time used (secs): CPU =		99  System =	      15
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


96.632u 2.542s 0:15.47 641.0%	0+0k 0+16776io 0pf+0w

Script done on 2025-05-26 17:24:43+1000
======================================================
Command used: wombat socdil1.par
======================================================

wombat socdil1.par
Script started on 2025-05-26 17:24:43+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../SimPed.dat
 Total no. of animal IDs found			   =	    13000
 No. of "subjects" in data			   =	     8000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		7
 adjact ivcol	 17226594    17226594
 Start of "GENMMD": no. of rows 		   =	    28001
 genmmd        5000	  19319 	  9
 genmmd       10000	  15073 	 14
 End of "GENMMD": no of subscripts		   =	   147895
 adjact ivcol	 17226594    17226594
 End of "SMBFCT": maxsub			   =	   145742	 28002
		  maxlnz			   =	   350860
		  nnops 			   = 0.316182E+07 0.100000E+16
 "Super-nodes" :  No. of nodes			   =	    12908
		  Max. size			   =	       26
 *** EM round	    0  log L =	-23841.8756	 D =   0.0000	    0.0000	Time	    2	     1
 *** EM round	    1  log L =	-23841.6131	 D =  0.26249	   0.40491E-02	Time	    3	     0
 *** EM round	    2  log L =	-23841.4698	 D =  0.14336	   0.21885E-02	Time	    3	     0
 *** EM round	    3  log L =	-23841.3763	 D =  0.93431E-01  0.12941E-02	Time	    3	     0
 *** EM round	    4  log L =	-23841.3065	 D =  0.69792E-01  0.87534E-03	Time	    3	     0
 *** EM round	    5  log L =	-23841.2492	 D =  0.57336E-01  0.68058E-03	Time	    3	     0
 *** EM round	    6  log L =	-23841.1991	 D =  0.50062E-01  0.58462E-03	Time	    3	     0
 *** AI iterate     7  log L =	-23838.1421	 D =   3.0570	   0.84132E-01	Time	    3	     0
 *** AI iterate     8  log L =	-23837.8348	 D =  0.30730	   0.32578E-01	Time	    3	     0
 *** AI iterate     9  log L =	-23837.7261	 D =  0.10867	   0.42406E-01	Time	    3	     0
 *** AI iterate    10  log L =	-23837.2345	 D =  0.49161	   0.21293E-01	Time	    3	     0
 *** AI iterate    11  log L =	-23837.0719	 D =  0.16266	   0.10274E-01	Time	    3	     0
 *** AI iterate    12  log L =	-23836.9690	 D =  0.10289	   0.86991E-02	Time	    3	     0
 *** AI iterate    13  log L =	-23836.9046	 D =  0.64378E-01  0.75573E-02	Time	    3	     0
 *** AI iterate    14  log L =	-23836.8657	 D =  0.38893E-01  0.77136E-02	Time	    3	     0
 *** AI iterate    15  log L =	-23836.8443	 D =  0.21450E-01  0.79231E-02	Time	    3	     0
 *** AI iterate    16  log L =	-23836.8383	 D =  0.59507E-02  0.10292E-01	Time	    3	     0
 *** AI iterate    17  log L =	-23836.8025	 D =  0.35792E-01  0.57626E-02	Time	    3	     0
 *** AI iterate    18  log L =	-23836.7909	 D =  0.11593E-01  0.30272E-02	Time	    3	     0
 *** AI iterate    19  log L =	-23836.7826	 D =  0.82993E-02  0.22259E-02	Time	    3	     0
 *** AI iterate    20  log L =	-23836.7767	 D =  0.58996E-02  0.31805E-02	Time	    3	     0
 *** AI iterate    21  log L =	-23836.7726	 D =  0.41740E-02  0.24636E-02	Time	    3	     0
 *** AI iterate    22  log L =	-23836.7702	 D =  0.23561E-02  0.43411E-02	Time	    3	     0
 *** AI iterate    23  log L =	-23836.7696	 D =  0.63424E-03  0.40785E-02	Time	    3	     0
 *** AI iterate    24  log L =	-23836.7612	 D =  0.83471E-02  0.31390E-02	Time	    3	     0
 *** AI iterate    25  log L =	-23836.7583	 D =  0.28628E-02  0.91854E-03	Time	    3	     0
 *** AI iterate    26  log L =	-23836.7559	 D =  0.24760E-02  0.15347E-02	Time	    3	     0
 *** AI iterate    27  log L =	-23836.7537	 D =  0.21700E-02  0.78755E-03	Time	    3	     0
 *** AI iterate    28  log L =	-23836.7519	 D =  0.18430E-02  0.18629E-02	Time	    3	     0
 *** AI iterate    29  log L =	-23836.7503	 D =  0.15459E-02  0.10888E-02	Time	    3	     0
 *** AI iterate    30  log L =	-23836.7492	 D =  0.11240E-02  0.25569E-02	Time	    3	     0
 *** AI iterate    31  log L =	-23836.7485	 D =  0.65475E-03  0.20393E-02	Time	    3	     0
 *** AI iterate    32  log L =	-23836.7458	 D =  0.26982E-02  0.18878E-02	Time	    3	     0
 *** AI iterate    33  log L =	-23836.7445	 D =  0.12930E-02  0.54755E-03	Time	    3	     0
 *** AI iterate    34  log L =	-23836.7434	 D =  0.11501E-02  0.12026E-02	Time	    3	     0
 *** AI iterate    35  log L =	-23836.7424	 D =  0.10192E-02  0.56176E-03	Time	    3	     0
 *** AI iterate    36  log L =	-23836.7415	 D =  0.85592E-03  0.15354E-02	Time	    3	     0
 *** AIREML : No convergence
 *** EM round	   37  log L =	-23836.9898	 D = -0.24831	   0.15211E-01	Time	    3	     1
 (PX-)EM iterate produced wrong step - aborted
 ... this is most likely due to numerical problems
 *** AI iterate    38  log L =	-23836.7408	 D =  0.68401E-03  0.96403E-03	Time	    3	     0
 *** AI iterate    39  log L =	-23836.7404	 D =  0.41912E-03  0.21760E-02	Time	    3	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.419118E-03
     Norm of gradient vector			   = 0.147112	  (should be close to 0)
     ... "Cholesky" scale			   = 0.195688E-01 (should be close to 0)
     Newton decrement				   =-0.171013E-02 (should be close to 0)
   1  animal+bnimal	     26000  zero soln.s       0
   2  group		      2000  zero soln.s       0
 SS residuals	532711.
 Eigenvalues of AI matrix
    118.992	   47.3370	  10.7872	 4.43112	3.36205
 writing out of var functions for correlated random
 effects not implemented - skipping ...
 Total time used (secs): CPU =	       141  System =	      23
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


137.694u 3.503s 0:23.94 589.7%	0+0k 0+16864io 0pf+0w

Script done on 2025-05-26 17:25:07+1000
======================================================
Command used: wombat --quapp socdil1.par
======================================================

wombat --quapp socdil1.par
Script started on 2025-05-26 17:25:07+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

   1	0.000000       -23836.707078
   2	0.500000       -23836.008717
   3	0.990000       -23836.740417
 Triplet of points selected:
 Factor 	  0.000000	    0.500000	      0.990000
 LogLike	-23836.707	  -23836.009	    -23836.740
 Optimum of parabola at       0.489232
  ... change from previous   -0.010768
  ... approximate std. error  0.413861
 Written out parameter file "wmbnew.par" - check it!
 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../SimPed.dat
 Total no. of animal IDs found			   =	    13000
 No. of "subjects" in data			   =	     8000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		7
 adjact ivcol	 17226594    17226594
 Start of "GENMMD": no. of rows 		   =	    28001
 genmmd        5000	  19319 	  9
 genmmd       10000	  15073 	 14
 End of "GENMMD": no of subscripts		   =	   147895
 adjact ivcol	 17226594    17226594
 End of "SMBFCT": maxsub			   =	   145742	 28002
		  maxlnz			   =	   350860
		  nnops 			   = 0.316182E+07 0.100000E+16
 "Super-nodes" :  No. of nodes			   =	    12908
		  Max. size			   =	       26
 *** EM round	    0  log L =	-23841.8756	 D =   0.0000	    0.0000	Time	    2	     1
 *** EM round	    1  log L =	-23841.6131	 D =  0.26249	   0.40491E-02	Time	    3	     0
 *** EM round	    2  log L =	-23841.4698	 D =  0.14336	   0.21885E-02	Time	    3	     0
 *** EM round	    3  log L =	-23841.3763	 D =  0.93431E-01  0.12941E-02	Time	    3	     0
 *** EM round	    4  log L =	-23841.3065	 D =  0.69792E-01  0.87534E-03	Time	    3	     0
 *** EM round	    5  log L =	-23841.2492	 D =  0.57336E-01  0.68058E-03	Time	    3	     0
 *** EM round	    6  log L =	-23841.1991	 D =  0.50062E-01  0.58462E-03	Time	    3	     0
 *** AI iterate     7  log L =	-23838.1421	 D =   3.0570	   0.84132E-01	Time	    3	     0
 *** AI iterate     8  log L =	-23837.8348	 D =  0.30730	   0.32578E-01	Time	    3	     0
 *** AI iterate     9  log L =	-23837.7261	 D =  0.10867	   0.42406E-01	Time	    3	     0
 *** AI iterate    10  log L =	-23837.2345	 D =  0.49161	   0.21293E-01	Time	    3	     0
 *** AI iterate    11  log L =	-23837.0719	 D =  0.16266	   0.10274E-01	Time	    3	     0
 *** AI iterate    12  log L =	-23836.9690	 D =  0.10289	   0.86991E-02	Time	    3	     0
 *** AI iterate    13  log L =	-23836.9046	 D =  0.64378E-01  0.75573E-02	Time	    3	     0
 *** AI iterate    14  log L =	-23836.8657	 D =  0.38893E-01  0.77136E-02	Time	    3	     0
 *** AI iterate    15  log L =	-23836.8443	 D =  0.21450E-01  0.79231E-02	Time	    3	     0
 *** AI iterate    16  log L =	-23836.8383	 D =  0.59507E-02  0.10292E-01	Time	    3	     0
 *** AI iterate    17  log L =	-23836.8025	 D =  0.35792E-01  0.57626E-02	Time	    3	     0
 *** AI iterate    18  log L =	-23836.7909	 D =  0.11593E-01  0.30272E-02	Time	    3	     0
 *** AI iterate    19  log L =	-23836.7826	 D =  0.82993E-02  0.22259E-02	Time	    3	     0
 *** AI iterate    20  log L =	-23836.7767	 D =  0.58996E-02  0.31805E-02	Time	    3	     0
 *** AI iterate    21  log L =	-23836.7726	 D =  0.41740E-02  0.24636E-02	Time	    3	     0
 *** AI iterate    22  log L =	-23836.7702	 D =  0.23561E-02  0.43411E-02	Time	    3	     0
 *** AI iterate    23  log L =	-23836.7696	 D =  0.63424E-03  0.40785E-02	Time	    3	     0
 *** AI iterate    24  log L =	-23836.7612	 D =  0.83471E-02  0.31390E-02	Time	    3	     0
 *** AI iterate    25  log L =	-23836.7583	 D =  0.28628E-02  0.91854E-03	Time	    3	     0
 *** AI iterate    26  log L =	-23836.7559	 D =  0.24760E-02  0.15347E-02	Time	    3	     0
 *** AI iterate    27  log L =	-23836.7537	 D =  0.21700E-02  0.78755E-03	Time	    3	     0
 *** AI iterate    28  log L =	-23836.7519	 D =  0.18430E-02  0.18629E-02	Time	    3	     0
 *** AI iterate    29  log L =	-23836.7503	 D =  0.15459E-02  0.10888E-02	Time	    3	     0
 *** AI iterate    30  log L =	-23836.7492	 D =  0.11240E-02  0.25569E-02	Time	    3	     0
 *** AI iterate    31  log L =	-23836.7485	 D =  0.65475E-03  0.20393E-02	Time	    3	     0
 *** AI iterate    32  log L =	-23836.7458	 D =  0.26982E-02  0.18878E-02	Time	    3	     0
 *** AI iterate    33  log L =	-23836.7445	 D =  0.12930E-02  0.54755E-03	Time	    3	     0
 *** AI iterate    34  log L =	-23836.7434	 D =  0.11501E-02  0.12026E-02	Time	    3	     0
 *** AI iterate    35  log L =	-23836.7424	 D =  0.10192E-02  0.56176E-03	Time	    3	     0
 *** AI iterate    36  log L =	-23836.7415	 D =  0.85592E-03  0.15354E-02	Time	    3	     0
 *** AIREML : No convergence
 *** EM round	   37  log L =	-23836.9898	 D = -0.24831	   0.15211E-01	Time	    3	     1
 (PX-)EM iterate produced wrong step - aborted
 ... this is most likely due to numerical problems
 *** AI iterate    38  log L =	-23836.7408	 D =  0.68401E-03  0.96403E-03	Time	    3	     0
 *** AI iterate    39  log L =	-23836.7404	 D =  0.41912E-03  0.21760E-02	Time	    3	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.419118E-03
     Norm of gradient vector			   = 0.147112	  (should be close to 0)
     ... "Cholesky" scale			   = 0.195688E-01 (should be close to 0)
     Newton decrement				   =-0.171013E-02 (should be close to 0)
   1  animal+bnimal	     26000  zero soln.s       0
   2  group		      2000  zero soln.s       0
 SS residuals	532711.
 Eigenvalues of AI matrix
    118.992	   47.3370	  10.7872	 4.43112	3.36205
 writing out of var functions for correlated random
 effects not implemented - skipping ...
 Total time used (secs): CPU =	       141  System =	      23
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


137.636u 3.682s 0:23.93 590.5%	0+0k 0+16888io 0pf+0w

Script done on 2025-05-26 17:25:31+1000
