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Command used: wombat caneig.par
======================================================

wombat caneig.par
Script started on 2025-05-26 17:26:04+1000
    Value for "small" pivot set to  2.000000000000000E-004
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

	   1 X1
	   2 X2
	   3 X3
	   4 X4
	   5 X5
	   6 X6
	   7 X7
	   8 X8
	   9 X9
 Penalized REML: option chosen			   =  KANEIG
		 form of canonical eigenvalues	   =  ORIGINAL
		 value for "ESS"		   =	    2.00

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../ped400.dat
 Total no. of animal IDs found			   =	     4400
 No. of "subjects" in data			   =	     4000
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =	       18
 adjact ivcol	124442730   124442730
 Start of "GENMMD": no. of rows 		   =	    39609
 End of "GENMMD": no of subscripts		   =	   139608
 adjact ivcol	124442730   124442730
 End of "SMBFCT": maxsub			   =	   108000	 39610
		  maxlnz			   =	   878445
		  nnops 			   = 0.113246E+08 0.100000E+16
 "Super-nodes" :  No. of nodes			   =	     4400
		  Max. size			   =	       19
 *** AI iterate     0  log L =	-32464.7470	 D =   0.0000	    0.0000	Time	    4	     3
 *** AI iterate     1  log L =	-30814.6496	 D =   1650.1	   0.57741	Time	   32	     5
 *** AI iterate     2  log L =	-29409.6759	 D =   1405.0	   0.43728	Time	   32	     5
 *** AI iterate     3  log L =	-28992.8918	 D =   416.78	   0.45499	Time	   32	     5
 *** AI iterate     4  log L =	-27986.1968	 D =   1006.7	   0.36719	Time	   32	     5
 *** AI iterate     5  log L =	-27561.5586	 D =   424.64	   0.43081	Time	   32	     5
 *** AI iterate     6  log L =	-26852.2763	 D =   709.28	   0.13911	Time	   32	     5
 *** AI iterate     7  log L =	-26140.8158	 D =   711.46	   0.19562	Time	   32	     5
 *** AI iterate     8  log L =	-25660.2230	 D =   480.59	   0.22564	Time	   32	     5
 *** AI iterate     9  log L =	-25202.5185	 D =   457.70	   0.33263	Time	   32	     5
 *** AI iterate    10  log L =	-24432.5326	 D =   769.99	   0.32018	Time	   32	     5
 *** AI iterate    11  log L =	-23767.4904	 D =   665.04	   0.29386	Time	   32	     5
 *** AI iterate    12  log L =	-23261.4676	 D =   506.02	   0.38007	Time	   31	     5
 *** AI iterate    13  log L =	-23185.2048	 D =   76.263	   0.30644	Time	   32	     5
 *** AI iterate    14  log L =	-23146.8586	 D =   38.346	   0.92092E-01	Time	   32	     5
 *** AI iterate    15  log L =	-23129.9293	 D =   16.929	   0.63276E-01	Time	   32	     5
 *** AI iterate    16  log L =	-23112.0668	 D =   17.863	   0.62001E-01	Time	   32	     5
 *** AI iterate    17  log L =	-23094.5124	 D =   17.554	   0.64184E-01	Time	   32	     5
 *** AI iterate    18  log L =	-23079.9846	 D =   14.528	   0.60092E-01	Time	   32	     5
 *** AI iterate    19  log L =	-23068.4457	 D =   11.539	   0.54796E-01	Time	   32	     5
 *** AI iterate    20  log L =	-23057.0026	 D =   11.443	   0.59401E-01	Time	   32	     5
 *** AI iterate    21  log L =	-23041.9889	 D =   15.014	   0.19488	Time	   31	     5
 *** AI iterate    22  log L =	-23016.1396	 D =   25.849	   0.10480	Time	   31	     5
 *** AI iterate    23  log L =	-23013.9703	 D =   2.1693	   0.12785E-01	Time	   32	     5
 *** AI iterate    24  log L =	-23013.9692	 D =  0.11754E-02  0.18035E-02	Time	   33	     5
 *** AI iterate    25  log L =	-23013.9690	 D =  0.15930E-03  0.32549E-03	Time	   32	     5
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.159302E-03
     Norm of gradient vector			   =  16.0332	  (should be close to 0)
     Newton decrement				   =-0.117848	  (should be close to 0)
Tuning factor	  =	    2.0000000000
Scaling factor	  =	    0.1111111111
Penalized log L   =    -23013.9689964453
Unpenalized log L =    -23013.9689964453
 Eigenvalues of AI matrix
    32831.2	   23232.1	  22807.9	 19718.8	18993.7        18587.6	      18170.6	     17918.5
    17162.2	   13386.3	  13146.4	 12870.0	9723.35        9542.66	      9269.37	     9024.71
    8708.17	   8510.59	  8413.92	 8204.65	7972.63        7801.46	      7473.45	     7268.95
    5988.62	   5674.86	  5275.42	 5017.02	4729.85        4685.52	      4411.71	     4234.10
    4049.86	   3965.50	  3782.99	 3762.19	3512.75        3477.15	      3277.21	     2988.97
    2824.60	   2535.66	  2484.22	 2040.74	1600.78        1099.94	      1089.89	     971.644
    891.770	   687.001	  570.018	 518.832	362.013        224.962	      178.698	     161.491
    124.509	   119.363	  110.705	 99.9246	88.2048        77.0547	      62.3294	     56.9494
    45.2669	   40.8574	  38.5923	 34.2190	31.7949        21.7891	      19.4585	     18.3334
    17.4558	   16.4947	  12.4784	 10.5652	9.66419        8.13214	      7.49253	     5.99999
    4.54943	   3.52807	  1.83728	 1.81960	1.34838       0.673572	     0.522214	    0.501121
   0.300187	  0.100898E-01
 Total time used (secs): CPU =	       817  System =	     142
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


797.854u 19.918s 2:22.60 573.4% 0+0k 0+41832io 0pf+0w

Script done on 2025-05-26 17:28:26+1000
