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Command used: wombat
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wombat
Script started on 2025-05-26 16:46:55+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../muexped.d
 Total no. of animal IDs found			   =	      339
 No. of "subjects" in data			   =	      284
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =	       10
 adjact ivcol	   735912      735912
 Start of "GENMMD": no. of rows 		   =	      762
 End of "GENMMD": no of subscripts		   =	     4407
 adjact ivcol	   735912      735912
 End of "SMBFCT": maxsub			   =	     4526	   763
		  maxlnz			   =	    10883
		  nnops 			   =  106367.	  0.100000E+16
 REML analysis has few parameters to be estimated
  --> switching to AI-REML w/out preliminary EM steps
 "Super-nodes" :  No. of nodes			   =	      319
		  Max. size			   =	       37
 *** AI iterate     0  log L =	-921.393316	 D =   0.0000	    0.0000	Time	    0	     0
 *** AI iterate     1  log L =	-916.777577	 D =   4.6157	   0.22702	Time	    0	     0
 *** AI iterate     2  log L =	-915.906833	 D =  0.87074	   0.86430E-01	Time	    0	     0
 *** AI iterate     3  log L =	-915.884697	 D =  0.22135E-01  0.16762E-01	Time	    0	     0
 *** AI iterate     4  log L =	-915.884624	 D =  0.73640E-04  0.17884E-02	Time	    0	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.736401E-04
     Norm of gradient vector			   = 0.493669E-01 (should be close to 0)
     ... "Cholesky" scale			   = 0.192797E-01 (should be close to 0)
     Newton decrement				   =-0.877724E-04 (should be close to 0)
   1  animal		       658  zero soln.s       0
   2  litterno			84  zero soln.s       0
 SS residuals	220.204       2569.63
 Eigenvalues of AI matrix
    86.9069	   61.8535	  28.0031	 13.2477	5.23858        3.80552	      2.64328	     1.46417
    1.20390
 Total time used (secs): CPU =		 0  System =	       0
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


0.778u 0.203s 0:00.40 242.5%	0+0k 0+736io 0pf+0w

Script done on 2025-05-26 16:46:55+1000
