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Command used: wombat w_grmeig.par
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wombat w_grmeig.par
Script started on 2025-05-26 17:31:05+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Parameter file opened : "w_grmeig.par"
**RUNOP --hinv -v**
**COM Example20/B1: Calculate G and G^{-1} using eigen-decomposition of G**
**MRK ../InputFiles/MarkerCounts.dat**
  Marker counts file : "../InputFiles/MarkerCounts.dat"
**SPECIAL**
**HINVERSE grmeig vectors**
**HINVERSE out grm**
**HINVERSE out grminv**
**HINVERSE SNP 3000**
  HINV: nsnp, msnp	   3000        3000
 HACK_NUMBER NSNPS
**HINVERSE center half**
  HINV: how_center HALF  5.000000000000000E-002
**HINVERSE epsilon 0.01d0**
  HINV: epsilon   1.000000000000000E-002
**END**

 End of parameter file reached :  11 lines read
 Colleau's method specified for calculation of A22 - but not needed
 "In core" storage for NRM Inverse switched on
 "H-inverse": calculate GRM/GRM-Inverse only
 tvec4	      3000
 chevck marks	     3000	 3000
 Begin: read M2 from ../InputFiles/MarkerCount sys-time 	    0.1 	    0.1
 chevck marks	     3000	 3000
 No. of rows in ../InputFiles/MarkerCounts.dat read=	      370
 No. of marker allele counts per row read	   =	     3000
 End: read M2 from .dat 		       sys-time 	    0.4 	    0.4
 End: centering M2			       sys-time 	    0.4 	    0.4
 End: calculating GRM			       sys-time 	    0.4 	    0.4
 end calc g22 F
 File "GRM.dat" written out:	   68627  non-zero elements (halfstored)
 end eigendecomp. g22  sys-time 	      0.6		0.6
 File "GRMInv.dat" written out:       68635  non-zero elements (halfstored)
 end inverting g22  sys-time		   0.8		     0.8
 File "GRMInv.dat" written out:       68635  non-zero elements (halfstored)
 Total time used (secs): CPU =		 4  System =	       0
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


3.719u 0.346s 0:00.99 409.0%	0+0k 0+26240io 0pf+0w

Script done on 2025-05-26 17:31:07+1000
