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Command used: wombat w_grmapy.par
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wombat w_grmapy.par
Script started on 2025-05-26 17:31:10+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Parameter file opened : "w_grmapy.par"
**RUNOP --hinv -v**
**COM Example20/G: approximate G^{-1} using APY scjeme**
**MRK ../InputFiles/MarkerCounts.dat**
  Marker counts file : "../InputFiles/MarkerCounts.dat"
**SPECIAL**
**HINVERSE SNP 3000**
  HINV: nsnp, msnp	   3000        3000
 HACK_NUMBER NSNPS
**HINVERSE grminv APY first 150**
 option not recognised & ignored150 expect: BIN
 MISZTAL	 150 FIRST  F
**HINVERSE out grm**
**HINVERSE epsilon 0.05d0**
  HINV: epsilon   5.000000000000000E-002
**END**

 End of parameter file reached :   9 lines read
 Calculate GRM-Inverse only using APY: expect first n
 animals in marker counts file to represent core
 size of core given =	      150
 "In core" storage for NRM Inverse switched on
 "H-inverse": calculate GRM/GRM-Inverse only
 tvec4	      3000
 chevck marks	     3000	 3000
 Begin: read M2 from ../InputFiles/MarkerCount sys-time 	    0.2 	    0.2
 chevck marks	     3000	 3000
 No. of rows in ../InputFiles/MarkerCounts.dat read=	      370
 No. of marker allele counts per row read	   =	     3000
 End: read M2 from .dat 		       sys-time 	    0.4 	    0.4
 End: centering M2			       sys-time 	    0.4 	    0.4
 Set up G for APY inversion MISZTAL
 End: calculating GRM			       sys-time 	    0.5 	    0.5
 end calc g22 F
 File "GPY.dat" written out:	   68635  non-zero elements (halfstored)
 End: setting up & writing out "GPY.dat"
 File "GPYInv.dat" written out:       44545  non-zero elements (partstored)
 Total time used (secs): CPU =		 2  System =	       0
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


2.462u 0.208s 0:00.72 369.4%	0+0k 0+10880io 0pf+0w

Script done on 2025-05-26 17:31:11+1000
