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Command used: wombat ww.par
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wombat ww.par
Script started on 2025-05-26 16:56:23+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Found redundant animals in pedigree -- new file "ReducedPedFile.dat"
 Total no. of IDs in pedigree file		   =	     3777
 ... no. of IDs "linked" to data		   =	     3426
 Pedigree file					   = ReducedPedFile.dat
 Total no. of animal IDs found			   =	     3426
 No. of "subjects" in data			   =	     3088
 No. of combinations of records 		   =		1
 No. of effect codes/ind. (maxnr)		   =		6
 adjact ivcol	  3735414     3735414
 Start of "GENMMD": no. of rows 		   =	     5822
 End of "GENMMD": no of subscripts		   =	   134324
 adjact ivcol	  3735414     3735414
 End of "SMBFCT": maxsub			   =	    96584	  5823
		  maxlnz			   =	   344209
		  nnops 			   = 0.606249E+08 0.100000E+16
 REML analysis has few parameters to be estimated
  --> switching to AI-REML w/out preliminary EM steps
 "Super-nodes" :  No. of nodes			   =	     4741
		  Max. size			   =	      674
 *** AI iterate     0  log L =	-10362.2435	 D =   0.0000	    0.0000	Time	    3	     1
 *** AI iterate     1  log L =	-10315.6345	 D =   46.609	   0.30631	Time	    1	     0
 *** AI iterate     2  log L =	-10314.3858	 D =   1.2487	   0.39428E-01	Time	    1	     0
 *** AI iterate     3  log L =	-10314.3810	 D =  0.48108E-02  0.30530E-02	Time	    1	     0
 *** AI iterate     4  log L =	-10314.3809	 D =  0.29847E-04  0.40138E-03	Time	    1	     0
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.298466E-04
     Norm of gradient vector			   = 0.831445E-02 (should be close to 0)
     ... "Cholesky" scale			   = 0.299688E-03 (should be close to 0)
     Newton decrement				   =-0.267325E-04 (should be close to 0)
   1  animal		      3331  zero soln.s       0
   2  gmdam		      1134  zero soln.s       1
   3  pedam		       956  zero soln.s       0
 SS residuals	581174.
 Eigenvalues of AI matrix
    8.78943	   1.92841	 0.515468	0.229573
 Total time used (secs): CPU =		 9  System =	       1
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


8.987u 0.596s 0:01.81 528.7%	0+0k 0+6368io 0pf+0w

Script done on 2025-05-26 16:56:24+1000
