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Command used: wombat sigam.par
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wombat sigam.par
Script started on 2025-05-26 16:56:40+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Option for covariances between random effects can be tricky!!!
 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../wgtpeds.dat
 Total no. of animal IDs found			   =	     3786
 No. of "subjects" in data			   =	     3425
 No. of combinations of records 		   =		3
 No. of effect codes/ind. (maxnr)		   =	       12
 adjact ivcol	 17097939    17097939
 Start of "GENMMD": no. of rows 		   =	    18373
 genmmd        5000	  14326 	 23
 End of "GENMMD": no of subscripts		   =	   455307
 adjact ivcol	 17097939    17097939
 End of "SMBFCT": maxsub			   =	   272443	 18374
		  maxlnz			   =	  2293082
		  nnops 			   = 0.113784E+10 0.100000E+16
 REML analysis has few parameters to be estimated
  --> switching to AI-REML w/out preliminary EM steps
 "Super-nodes" :  No. of nodes			   =	     8025
		  Max. size			   =	     1809
 *** AI iterate     0  log L =	-15628.4638	 D =   0.0000	    0.0000	Time	    5	     2
 *** AI iterate     1  log L =	-15487.0318	 D =   141.43	   0.40790	Time	    9	     1
 *** AI iterate     2  log L =	-15354.8099	 D =   132.22	   0.11013	Time	    9	     1
 *** AI iterate     3  log L =	-15342.9737	 D =   11.836	   0.13158	Time	    9	     1
 *** AI iterate     4  log L =	-15342.4951	 D =  0.47857	   0.40703E-01	Time	    9	     1
 *** AI iterate     5  log L =	-15342.4562	 D =  0.38871E-01  0.97120E-02	Time	    9	     1
 *** AI iterate     6  log L =	-15342.4514	 D =  0.48653E-02  0.28043E-02	Time	    9	     1
 *** AI iterate     7  log L =	-15342.4507	 D =  0.69176E-03  0.94647E-03	Time	    9	     1
 *** AI iterate     8  log L =	-15342.4506	 D =  0.10246E-03  0.34324E-03	Time	    9	     1
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.102461E-03
     Norm of gradient vector			   = 0.461785E-01 (should be close to 0)
     ... "Cholesky" scale			   = 0.570067E-02 (should be close to 0)
     Newton decrement				   =-0.738442E-04 (should be close to 0)
   1  animal+gmdam	     15144  zero soln.s      16
   2  pedam		      2070  zero soln.s      10
 SS residuals	9341.48       538659.
 Eigenvalues of AI matrix
    423.074	   195.708	  101.379	 70.9176	38.7933        18.1439	      14.5533	     11.7439
    9.63623	   8.19340	  7.49527	 5.38896	2.06143       0.535895	     0.277833	    0.198522
 Total time used (secs): CPU =		86  System =	      13
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


82.228u 4.264s 0:13.14 658.1%	0+0k 0+15376io 0pf+0w

Script done on 2025-05-26 16:56:54+1000
