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Command used: wombat wombat.par
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wombat wombat.par
Script started on 2025-05-26 17:01:37+1000
 WOMBAT 26-05-2025 Maximum no. of threads to be used set to	      8

 Will try to allocate large array: "RAWDAT" next
   ... size required		 :	 258424. elements
   ... individual dimensions	 :	     8	     32303
 Sucessfully read RAW data for in-core storage
 No. of records in total			   =	    32303
 No. of records in subset to be used		   =	    32303
Data file: Low proportion of repeated records - trait  1    31.4%
	   No. of individuals with a single record	   4724
	   No. of individuals with repeated records	   2165
 Routine "REDUCEPEDS" to eliminate animals not connected to the data
 -> this may not account properly for genotyped animals & their ancestors
    do not use this routine if you have such information - perform equivalent
    calculations yourself prior to running WOMBAT & use run option --norped
 Pedigree file					   = ../mcw+gl_peds.dat
 Total no. of animal IDs found			   =	    72495
 Successfully allocated arrays for in-core NRM
  inbreed : at	   25000  of	 66169
  inbreed : at	   50000  of	 66169
  NRM : at     50000  of     66169
  NRM : at     50000  of     66169
  inbreed : at	   25000  of	 41401
       29278	   10000 F F F
 Successfully allocated arrays for in-core DATA
 alloc cor nr	    29278	10000 T T T
 No. of "subjects" in data			   =	    29278
 No. of combinations of records 		   =	       10
 No. of effect codes/ind. (maxnr)		   =		9
 WARNING:
 Unequal no. of repeated records for combination	   8  n=	  18
 Trait =	    1  No. of observations =	       2
 Trait =	    2  No. of observations =	       1
 WARNING:
 Unequal no. of repeated records for combination	   9  n=	   3
 Trait =	    1  No. of observations =	       3
 Trait =	    2  No. of observations =	       1
 Option set: residual covariances among repeated records for different traits: "INDESCR"
 adjact ivcol	196014168   196014168
 Start of "AMD": no. of rows			   =	   197040
    amd at:	  50000
    amd at:	 100000
 End of "AMD": no of subscripts 		   =	  3015237
 adjact ivcol	196014168   196014168
 End of "SMBFCT": maxsub			   =	  1971582	197041
		  maxlnz			   =	 22659420
		  nnops 			   = 0.291682E+11 0.100000E+16
 REML analysis has few parameters to be estimated
  --> switching to AI-REML w/out preliminary EM steps
 "Super-nodes" :  No. of nodes			   =	   144382
		  Max. size			   =	     4438
 *** AI iterate     0  log L =	-85180.4911	 D =   0.0000	    0.0000	Time	   43	    25
 *** AI iterate     1  log L =	-84986.1627	 D =   194.33	   0.78001E-01	Time	   75	    28
 *** AI iterate     2  log L =	-84982.3161	 D =   3.8465	   0.13345E-01	Time	   75	    29
 *** AI iterate     3  log L =	-84982.2731	 D =  0.42984E-01  0.94544E-03	Time	   75	    29
 *** AI iterate     4  log L =	-84982.2731	 D =  0.26643E-04  0.35415E-04	Time	   75	    28
 *** AIREML seems to have converged: Change in log L <	0.500000E-03
     Last change in log L			   = 0.266432E-04
     Norm of gradient vector			   = 0.159953	  (should be close to 0)
     ... "Cholesky" scale			   = 0.435508E-01 (should be close to 0)
     Newton decrement				   =-0.274720E-04 (should be close to 0)
   1  animal		    132338  zero soln.s       0
   2  peanim		      6889  zero soln.s       0
   3  pedam		     14587  zero soln.s       0
   4  gmdam		     41401  zero soln.s      80
 SS residuals  0.187640E+07   163066.
 Eigenvalues of AI matrix
    1876.33	   140.142	  49.2585	 16.3882	10.4404        10.1467	      3.28675	    0.595367
   0.359396
 Total time used (secs): CPU =	       348  System =	     142
 Machine used = "didgeridoo"
 "WOMBAT" has finished !  26/05/2025


336.846u 11.857s 2:22.08 245.4% 0+0k 0+91128io 0pf+0w

Script done on 2025-05-26 17:04:00+1000
