Differences
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wombat:sexlinked [2018/08/30] kmeyer |
wombat:sexlinked [2018/08/30] (current) kmeyer |
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| - | <WRAP info 30% right :en> | + | <WRAP caution 30% right :en> |
| <file C xlink_example.par> | <file C xlink_example.par> | ||
| PED pedigree.dat +SEX | PED pedigree.dat +SEX | ||
| Line 25: | Line 25: | ||
| 20 | 20 | ||
| </file> | </file> | ||
| - | </WRAP>WOMBAT has an in-built facility to allow for X-linked genetic effects. In brief, | + | </WRAP> |
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| + | WOMBAT has an in-built facility to allow for X-linked genetic effects. In brief, | ||
| this is fitted as an additional random effect and WOMBAT can calculate the appropriate inbreeding coefficients and set up | this is fitted as an additional random effect and WOMBAT can calculate the appropriate inbreeding coefficients and set up | ||
| the inverse of the corresponding relationship matrix directly from the list of pedigree information. | the inverse of the corresponding relationship matrix directly from the list of pedigree information. | ||
| Line 35: | Line 37: | ||
| - Finally, the parameter file needs to contain a ''VAR'' statement for the ''xlink'' effect, together with a starting value for the pertaining variance component. | - Finally, the parameter file needs to contain a ''VAR'' statement for the ''xlink'' effect, together with a starting value for the pertaining variance component. | ||
| - | <bibtex> | + | <code | bib> |
| @ARTICLE{fern90, | @ARTICLE{fern90, | ||
| author = {Fernando, R. L. and Grossman, M.}, | author = {Fernando, R. L. and Grossman, M.}, | ||
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| url = {http://dx.doi.org/10.1007/bf00224018} | url = {http://dx.doi.org/10.1007/bf00224018} | ||
| } | } | ||
| - | </bibtex> | + | </code> |
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