Download WOMBAT Examples
The worked
Examples are provided in compressed form, as gzipped
tar files. On extraction, files will be placed into the directory
Examples/Examplen where
n is the example
number. Individual runs are shown in subdirectories
A,
B,
C, etc. The file
WhatIsIt gives a brief decription of what is what. Some directories contain an additional pdf
file with documentation.
-
example1.tar.gz Simple univariate analysis
Size: 16 KB, 5762 downloads (since April 28,
2010), Version: 12/04/22.
-
example2.tar.gz Bivariate analysis with additional random effect
Size: 54 KB, 3354 downloads (since April 28,
2010), Version: 12/04/22.
-
example3.tar.gz Longitudinal data: RR analysis
Size: 269 KB, 2576 downloads (since April 28,
2010), Version: 12/04/22.
-
example4.tar.gz 4-trait analysis
Size: 1.82 MB, 1757 downloads (since April 28,
2010), Version: 12/04/22.
-
example5.tar.gz 6 traits
Size: 4.98 MB, 1218 downloads (since April 28,
2010), Version: 12/04/22.
-
example6.tar.gz 8 traits
Size: 3.25 MB, 1285 downloads (since April 28,
2010), Version: 12/04/22.
-
example7.tar.gz 4 weights subject to maternal effects
Size: 3.82 MB, 1663 downloads (since April 28,
2010), Version: 12/04/22.
-
example8.tar.gz Bivariate analysis, repeated records for one trait
Size: 5.20 MB, 1309 downloads (since April 28,
2010), Version: 12/04/22.
-
example9.tar.gz Random regression analysis
Size: 8.20 MB, 1503 downloads (since April 28,
2010), Version: 12/04/22.
-
example10.tar.gz The gryphon example from Wilson et al
Size: 251 KB, 1479 downloads (since April 28,
2010), Version: 12/04/22.
-
example11.tar.gz Multivariate RR analysis
Size: 382 KB, 1753 downloads (since April 28,
2010), Version: 12/04/22.
-
example12.tar.gz Use of WOMBAT for stand-alone matrix inversion
Size: 5 KB, 372 downloads (since July 10,
2019), Version: 12/04/22.
-
example13.tar.gz Multivariate analyses with repeated records
Size: 1.90 MB, 1357 downloads (since September 23,
2011), Version: 12/04/22.
-
example14.tar.gz GWAS analysis (SNP Snappy)
Size: 102 KB, 1793 downloads (since September 21,
2011), Version: 12/04/22.
-
example15.tar.gz "Pooling" using penalized likelihood; updated: include tutorial.
Size: 409 KB, 1160 downloads (since April 24,
2012), Version: 12/04/22.
-
example16.tar.gz Fitting of "social" genetic effects models
Size: 2.05 MB, 1019 downloads (since August 15,
2012), Version: 12/04/22.
-
example17.tar.gz Sampling based approximation of standard errors
Size: 39 KB, 1246 downloads (since July 22,
2013), Version: 12/04/22.
-
example18.tar.gz Basic single step BLUP module
Size: 206 KB, 1343 downloads (since April 30,
2014), Version: 12/04/22.
-
example19.tar.gz Penalized REML estimation for "simple" penalties
Size: 3.49 MB, 777 downloads (since December 15,
2015), Version: 12/04/22.
-
example20.tar.gz New: use of module hinverse (includes documentation)
Size: 18.04 MB, 683 downloads (since October 17,
2017), Version: 12/04/22.
-
example21.tar.gz Additional options for single-step BLUP
Size: 1.72 MB, 813 downloads (since January 25,
2018), Version: 12/04/22.
-
example22.tar.gz New: 'Back-solve' for marker effects from genomic breeding values
Size: 220 KB, 434 downloads (since September 13,
2019), Version: 12/04/22.
- All examples, packaged in two big files:
example1to12.tar.gz
Size: 28.24 MB, 348 downloads (since July 10,
2019), Version: 12/04/22.
example13to22.tar.gz
Size: 0 B, 0 downloads (since July 10,
2019), .
Note for Windows users: The files in the Example
directories are Linux files. Linux and Windows differ in the
`end-of-line' codes used. Hence, you may need to convert the files provided
before being able to repeat the analyses; look for a
tool like like `unix2dos'!