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Download WOMBAT Examples
The worked Examples are provided in compressed form, as gzipped tar files. On extraction, files will be placed into the directory Examples/Example-
example1.tar.gz Simple univariate analysis
Size: 16 KB, 7140 downloads (since April 28, 2010), Version: 07/03/23. -
example2.tar.gz Bivariate analysis with additional random effect
Size: 65 KB, 4202 downloads (since April 28, 2010), Version: 07/03/23. -
example3.tar.gz Longitudinal data: RR analysis
Size: 269 KB, 3058 downloads (since April 28, 2010), Version: 07/03/23. -
example4.tar.gz 4-trait analysis
Size: 1.82 MB, 2270 downloads (since April 28, 2010), Version: 07/03/23. -
example5.tar.gz 6 traits
Size: 4.99 MB, 1542 downloads (since April 28, 2010), Version: 07/03/23. -
example6.tar.gz 8 traits
Size: 2.27 MB, 1584 downloads (since April 28, 2010), Version: 07/03/23. -
example7.tar.gz 4 weights subject to maternal effects
Size: 3.82 MB, 2038 downloads (since April 28, 2010), Version: 07/03/23. -
example8.tar.gz Bivariate analysis, repeated records for one trait
Size: 5.20 MB, 1678 downloads (since April 28, 2010), Version: 07/03/23. -
example9.tar.gz Random regression analysis
Size: 8.20 MB, 1829 downloads (since April 28, 2010), Version: 07/03/23. -
example10.tar.gz The gryphon example from Wilson et al
Size: 250 KB, 1794 downloads (since April 28, 2010), Version: 07/03/23. -
example11.tar.gz Multivariate RR analysis
Size: 386 KB, 2047 downloads (since April 28, 2010), Version: 07/03/23. -
example12.tar.gz Use of WOMBAT for stand-alone matrix inversion
Size: 5 KB, 671 downloads (since July 10, 2019), Version: 07/03/23. -
example13.tar.gz Multivariate analyses with repeated records
Size: 1.90 MB, 1716 downloads (since September 23, 2011), Version: 07/03/23. -
example14.tar.gz GWAS analysis (SNP Snappy)
Size: 102 KB, 2173 downloads (since September 21, 2011), Version: 07/03/23. -
example15.tar.gz "Pooling" using penalized likelihood; updated: include tutorial.
Size: 409 KB, 1412 downloads (since April 24, 2012), Version: 07/03/23. -
example16.tar.gz Fitting of "social" genetic effects models
Size: 2.58 MB, 1261 downloads (since August 15, 2012), Version: 07/03/23. -
example17.tar.gz Sampling based approximation of standard errors
Size: 39 KB, 1571 downloads (since July 22, 2013), Version: 07/03/23. -
example18.tar.gz Basic single step BLUP module
Size: 195 KB, 1738 downloads (since April 30, 2014), Version: 07/03/23. -
example19.tar.gz Penalized REML estimation for "simple" penalties
Size: 3.49 MB, 1006 downloads (since December 15, 2015), Version: 07/03/23. -
example20.tar.gz New: use of module hinverse (includes documentation)
Size: 18.04 MB, 963 downloads (since October 17, 2017), Version: 07/03/23. -
example21.tar.gz Additional options for single-step BLUP
Size: 1.71 MB, 1126 downloads (since January 25, 2018), Version: 07/03/23. -
example22.tar.gz 'Back-solve' for marker effects from genomic breeding values
Size: 220 KB, 750 downloads (since September 13, 2019), Version: 07/03/23. -
example23.tar.gz UPG and MF
Size: 2.59 MB, 143 downloads (since July 2022) , Version: 29/03/23. -
example24.tar.gz Estimate weighting for residual polygenic effects
Size: 8.41 MB, 224 downloads (since July 2022) , Version: 07/03/23.
Note for Windows users: The files in the Example directories are Linux files. Linux and Windows differ in the `end-of-line' codes used. Hence, you may need to convert the files provided before being able to repeat the analyses; look for a tool like like `unix2dos'!